Received: (at 77716) by debbugs.gnu.org; 21 Apr 2025 18:35:01 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Mon Apr 21 14:35:01 2025 Received: from localhost ([127.0.0.1]:38516 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1u6vyu-0001Xh-A9 for submit <at> debbugs.gnu.org; Mon, 21 Apr 2025 14:35:01 -0400 Received: from wolfsden.cz ([37.205.8.62]:55008) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <~@wolfsden.cz>) id 1u6vyr-0001XX-Hr for 77716 <at> debbugs.gnu.org; Mon, 21 Apr 2025 14:34:59 -0400 Received: by wolfsden.cz (Postfix, from userid 104) id 6101239FB3D; Mon, 21 Apr 2025 18:34:55 +0000 (UTC) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=wolfsden.cz; s=mail; t=1745260495; bh=fruI8cej8RE17xX3TJ8BlGRGD6nRtNSbLZ3QHQV2IYA=; h=From:To:Cc:Subject:In-Reply-To:References:Date; b=rWGMuBX5pq3KwXfgyoovdQAqQkaOJfKu8AnZNs6fneMx29XjlZ9kfKFX2Lj/Kux94 XrlIJKx7i5iW3wgK0ON8etcf8TV6gEq3dSf4AO9rdiBhgOf9tvIfZt2+Pgnu+7W3qu g5wHbqQmL1gfvDxl2YtYzXwGCsBKqbYI88Qe9VuNIm3IDBVPuxPgr+R4S6KVbeHDDV 6c98X8UJmoVKwkZuyGeAcJD6uhvsfMxBc2uH0HfXIzM6pPxoyFODQcWbGqfexrq0qp Swv2xQ1wOOqDP5jXrhOtojmwHQTBjrQWZ350RAIcYmRsOsmbi5joke9eMFQ13aV11N sPTuYsPmCsUCcHG0uNrZye0ok5jqkCliPBlKguWgfOymUc4Y9nQaQjpl3EiOww1fg1 F7/JzmogtTDkKJ2WgK+3bwbcnCqCMRqsFOhUOhv4WdMcZUzJgP0KhOJtVxOWuPGtz8 flga6HbuPzg/FF3ViIKIKDuw6C7iLjzzmExw51b1MgR/dJ7atghjmJxXodmK4xqteG xioQ+ePYGOZpZhY2ND10mdulweoxK2R2Ie4oD/n8Ba2gNmX4Zb5Ns/WwlXSgvb1T4R XhFqLOAdOx3oooFBeYF4Z2KwdLhKhmS6ej/Z2mFFlaLAdHgXrARMg2k9/iIy1uYswO Q04N7SDRbKYlAzhH3680EuYg= X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on wolfsden X-Spam-Level: X-Spam-Status: No, score=-3.1 required=5.0 tests=ALL_TRUSTED,BAYES_00, DKIM_SIGNED,DKIM_VALID,DKIM_VALID_AU,DKIM_VALID_EF,URIBL_BLOCKED autolearn=unavailable autolearn_force=no version=3.4.6 Received: from localhost (89-24-35-10.nat.epc.tmcz.cz [89.24.35.10]) by wolfsden.cz (Postfix) with ESMTPSA id 1EA3239F843; Mon, 21 Apr 2025 18:34:54 +0000 (UTC) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=wolfsden.cz; s=mail; t=1745260494; bh=fruI8cej8RE17xX3TJ8BlGRGD6nRtNSbLZ3QHQV2IYA=; h=From:To:Cc:Subject:In-Reply-To:References:Date; b=FQsxXeXcryvQ30KXn5Ymr4zPvlZP1Yv+WBMZZgyUXe6Aho3Zc9kOkmhZKRRcQ/vyI UbH/iAXLrRNFEpY5PwbIQFXewFroUUFrp2KlC/jUX0c1R5f1INrDU88hs25Qdg7F03 MryKxdltiYKEr26dqxCAVbUaN9m42bQshDrmt++NKOMMzzvuGnyxhIhMDsAbg405LY lKs2hZlUKOt3VnYOEvTGb7bdx+rGgNiURXNFBI38dEC7yrHf6goezUEliYvjBRMjsJ 71/x9pXL9USu/ijwCdSvRv+D9XKEhQ7oZXkDr0MG2p1NEtXNpNAzaYU8Q1AqZ9AHZN TySDjDAPSqVzTfGnxO0iyH4kY27YQ3A/Ybi6AkiUNqyqtTO/CMgB608lN6Xroit+Jh s9DxJ3WvbaZmxDSDUk9lGTW8aOi40Qnp3MI3VOzlB6OnpjF+dYqR7iJZ5GqyMPBTLa vQVRuCk1VX8YhJZUac7pbDDJwTwk9Pdd4dQMr4tCbqIlsprxTWdCTz7t7tRggDG+l6 EFPv1IEnYRfKcL5wNaYAn2Nw5ym5yU50J/YveDd7Gdb5ezR2RUBPyKyoBTyWwekmCN vLl4W/Qyss/L+pnUHdFzVcbEhHxx3kHjGQ6YOwdOCOSvjGRIlDELcUF9H1U7yuuL6b lQDOJR2IVx6+F05Oc0kqeAYc= From: Tomas Volf <~@wolfsden.cz> To: Ludovic =?utf-8?Q?Court=C3=A8s?= <ludo@HIDDEN> Subject: Re: bug#77716: Corrupted store after Guix deploy In-Reply-To: <87o6wp8tcf.fsf@HIDDEN> ("Ludovic =?utf-8?Q?Court=C3=A8s=22'?= =?utf-8?Q?s?= message of "Mon, 21 Apr 2025 16:47:12 +0200") References: <87iknb66t6.fsf@HIDDEN> <87o6wp8tcf.fsf@HIDDEN> Date: Mon, 21 Apr 2025 20:34:52 +0200 Message-ID: <87tt6h748j.fsf@HIDDEN> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: multipart/signed; boundary="=-=-="; micalg=pgp-sha512; protocol="application/pgp-signature" X-Spam-Score: 0.0 (/) X-Debbugs-Envelope-To: 77716 Cc: 77716 <at> debbugs.gnu.org X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -1.0 (-) --=-=-= Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Ludovic Court=C3=A8s <ludo@HIDDEN> writes: > Hello, > > Tomas Volf <~@wolfsden.cz> writes: > >> The permissions on the very top level directory differ (which one are >> correct?): >> >> Laptop: >> >> --8<---------------cut here---------------start------------->8--- >> $ ls -al /gnu/store/ | grep 1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden >> drwxr-xr-x 1 root root 16 Jan 1 1970 1bjf1lza4= i7fc1jh8qzb1n9xnv3rfi17-wolfsden >> --8<---------------cut here---------------end--------------->8--- >> >> Remote: >> >> --8<---------------cut here---------------start------------->8--- >> $ ls -al /gnu/store/ | grep 1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden >> dr-xr-xr-x 1 root root 16 Jan 1 1970 1bjf1lza4i7fc1jh8qzb1n= 9xnv3rfi17-wolfsden >> --8<---------------cut here---------------end--------------->8--- >> >> >> >> The target of symbolic link in the store item differs. >> >> Laptop: >> >> --8<---------------cut here---------------start------------->8--- >> $ ls -l /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile= /site/ >> total 4 >> lrwxrwxrwx 1 root root 61 Jan 1 1970 3.0 -> /gnu/store/rmwi813mcsg8d5i= lzq0rxwqd8dp558r5-wolfsden-989d91d/ >> --8<---------------cut here---------------end--------------->8--- >> >> Remote: >> >> --8<---------------cut here---------------start------------->8--- >> $ ls -l /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile= /site/ >> total 4 >> lrwxrwxrwx 1 root root 60 Jan 1 1970 3.0 -> /gnu/store/rmwi813mcsg8d5i= lzq0rxwqd8dp558r5-wolfsden-989d91d >> --8<---------------cut here---------------end--------------->8--- >> >> Notice that for the Laptop, the target ends in `/', for the Remote it >> does not. > > Interesting. > > There are several code paths to add a store item to the store. One is > through (guix store =E2=80=A6), use by =E2=80=98guix offload=E2=80=99. O= ne is through =E2=80=98guix > substitute=E2=80=99, which restores nars it downloaded. One is through a= build > via guix-daemon (C++ code). > > Could you tell how these two differing things were obtained? > > On each machine, run =E2=80=98guix build --log-file /gnu/store/1bjf1lza4i= 7fc1jh8qzb1n9xnv3rfi17-wolfsden=E2=80=99. If > there=E2=80=99s a local log file, it was built locally or offloaded; othe= rwise > it was substituted. Definitely, I am pretty sure I know how these were acquired. It is my personal Guix channel, and I am not using any substitutes other then the official ones. On my local system (the "Laptop" above), I have executed the following: =2D-8<---------------cut here---------------start------------->8--- guix pull --no-offload -C wolfsnet/files/channels-base.sex =2D-8<---------------cut here---------------end--------------->8--- During that, Guix was pulled using this channels file: =2D-8<---------------cut here---------------start------------->8--- (cons* (channel (name 'guix) (url "https://git.wolfsden.cz/.git/guix") (introduction (make-channel-introduction "028e445a2028068e3c83996daa281057f19141a0" (openpgp-fingerprint "B783 49B3 8C14 7D36 2988 68A4 2FBF EE7D B67F C1A9")))) (channel (name 'wolfsden) (url "https://git.wolfsden.cz/.git/wolfsden") (introduction (make-channel-introduction "49d7c72d2c3ae36ae8cf045dc7c00da29801af2c" (openpgp-fingerprint "B783 49B3 8C14 7D36 2988 68A4 2FBF EE7D B67F C1A9")))) (channel (name 'nonguix) (url "https://gitlab.com/nonguix/nonguix") (introduction (make-channel-introduction "897c1a470da759236cc11798f4e0a5f7d4d59fbc" (openpgp-fingerprint "2A39 3FFF 68F4 EF7A 3D29 12AF 6F51 20A0 22FB B2D5")))) (filter (negate guix-channel?) %default-channels)) =2D-8<---------------cut here---------------end--------------->8--- Since 'wolfsden has no substitutes on official servers, the store item was built locally (on "Laptop"). After that, I did `guix deploy' onto "Remote". Since I am using the channel in few places in the system definition, it was copied over to "Remote" as part of the deploy. Additionally I am using the "current" Guix as the (guix) field of the guix-configuration, but I am pretty sure that is not relevant here, so I am including it just for completeness (in case I am wrong). =2D-8<---------------cut here---------------start------------->8--- (define (%current-guix) (let ((guix-bin (car (command-line)))) (unless (string-suffix? "/bin/guix" guix-bin) (error "Does not look like guix binary" guix-bin)) (let* ((guix-profile (string-drop-right guix-bin 9)) (guix-profile (canonicalize-path guix-profile))) (package (name "custom-guix") (version "1") (source #f) (build-system trivial-build-system) (arguments (list #:builder #~(symlink #$guix-profile #$output))) (home-page #f) (synopsis #f) (description #f) (license #f))))) [..] (operating-system ... (services (modify-services %base-services (guix-service-type config =3D> (guix-configuration (inherit config) (channels %channels) (guix (%current-guix))))))) =2D-8<---------------cut here---------------end--------------->8--- To sum up, to the "broken" system ("Remote") the store item got via `guix deploy'. > > Could you also report the guix-daemon versions that are running on each > machine? Sadly I am not sure how to tell now :/. My laptop got updated and the VM got shut down. I will be sure to gather this information next time. Maybe it would be useful to include this information in the log files for the builds. All I can say now is that guix-daemon on both was "reasonably recent", definitely under 2 months old, probably under month. > > An interesting puzzle. :-) I am glad you have found this interesting. :) Tomas =2D-=20 There are only two hard things in Computer Science: cache invalidation, naming things and off-by-one errors. --=-=-= Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEEt4NJs4wUfTYpiGikL7/ufbZ/wakFAmgGj80OHH5Ad29sZnNk ZW4uY3oACgkQL7/ufbZ/wakdahAArzOksm76LIjrbW6LSXvyUXGueyN5ivw0P0XS XqvknwNM/ddt8LI7ZSX1N7VB2jSVBjr8PEuwmUO1sZQ95p5gFcaSl5ZxaE+aZjsF v5hN2LVQz49tqURYs1V/Cfrb3IsXkUZMFYDR7tW6uIIK89VPqvv6NTEyoYH1tliX QqtRCZc0iPPrVmSz/rHfCpjArX76OdI/xSHUM2d2lXwJF9n8+XV1MbVkPSeFPjTh trVKg5eK2PakOkMEwSxSVHciohTC/3ivcA+NCfKH3wJpmvWDUOHY+SmBDYqByjMp +YbfzPjoRbNlvR6LJ7nNQko+grAEWyO1iL0U3EvguA7Vvqmiewp2BFDbgFHb9MjD OccyUdFj0sxEAOljeXtVar/MP1y83T2GNWn+DTLEzmEJwV+UMmSdnlYiH//hlnK0 mTMFE/bKIwVNSjCkvhcttQ5FutB3n+Tjbh4F+VnIaNXu+kjxqi5zJ6uaPqiSZXpG 8u2XgUOSHF0HYtvVvjSXizUThCwpDZq8RU/xql8ojROPmOtCHRHOrFLsRniYIxz3 fz1+kguyKw5EScmLMu3bZO6sjfWxRn9VptAT8wkfGW/gmxNd1fPmH0LSSRXGE0fO YAny2Ez6i4FCsxhWUc5BE8Okqm5AodCgGTDsKNof2xP4Y54dqT45bJE8oL0Um8hc G1MXfPA= =rOpT -----END PGP SIGNATURE----- --=-=-=--
bug-guix@HIDDEN
:bug#77716
; Package guix
.
Full text available.Received: (at 77716) by debbugs.gnu.org; 21 Apr 2025 15:18:34 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Mon Apr 21 11:18:33 2025 Received: from localhost ([127.0.0.1]:36674 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1u6sum-0007aq-EZ for submit <at> debbugs.gnu.org; Mon, 21 Apr 2025 11:18:33 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]:44670) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <ludo@HIDDEN>) id 1u6suh-0007Yz-Pn for 77716 <at> debbugs.gnu.org; Mon, 21 Apr 2025 11:18:29 -0400 Received: from fencepost.gnu.org ([2001:470:142:3::e]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <ludo@HIDDEN>) id 1u6sub-0002rt-IA; Mon, 21 Apr 2025 11:18:21 -0400 DKIM-Signature: v=1; a=rsa-sha256; q=dns/txt; c=relaxed/relaxed; d=gnu.org; s=fencepost-gnu-org; h=MIME-Version:Date:References:In-Reply-To:Subject:To: From; bh=1qRGdMfSp8+HSONaWIPYR6YYFgGfKNRp616bqSuCb9k=; b=VFIwX+lBdb+WifHJllMo ZR1pjMjz5PaUi3Qr4bY6ME6LT0396tzIInul6jhiERJEU2THMNroA4Wb7bfEzYqNorWEIZuoOvgzD F+4JCI/KYXRmFUH5qOEPqsIL/Ce6aobXihIJ4zk10xiKY9omBLuvNTJ6W9H2htlaYwrWkNG5mQ1ME JxNZEbtvvUtN9eeP3vewkFKy9olW7EAPbiZVX7MPdSFp8TLgqlVjCK0Ga/y1XUA1udjbV/y8FSiIA jsGNQtkRmvHy84ZAmOKCXwfVPW7p3KQ5ZkImsm2YPlVGS5iVOSFQEAqBISk4fe+583Z5j1aFKEmZb QK7WoxlO4u+dAA==; From: =?utf-8?Q?Ludovic_Court=C3=A8s?= <ludo@HIDDEN> To: Tomas Volf <~@wolfsden.cz> Subject: Re: bug#77716: Corrupted store after Guix deploy In-Reply-To: <87iknb66t6.fsf@HIDDEN> (Tomas Volf's message of "Thu, 10 Apr 2025 23:32:53 +0200") References: <87iknb66t6.fsf@HIDDEN> User-Agent: mu4e 1.12.9; emacs 29.4 X-URL: https://people.bordeaux.inria.fr/lcourtes/ X-PGP-Fingerprint: 3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5 X-OS: x86_64-pc-linux-gnu X-Revolutionary-Date: Duodi 2 =?utf-8?Q?Flor=C3=A9al?= an 233 de la =?utf-8?Q?R=C3=A9volution=2C?= jour du =?utf-8?Q?Ch=C3=AAne?= Date: Mon, 21 Apr 2025 16:47:12 +0200 Message-ID: <87o6wp8tcf.fsf@HIDDEN> MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable X-Spam-Score: -2.3 (--) X-Debbugs-Envelope-To: 77716 Cc: 77716 <at> debbugs.gnu.org X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -3.3 (---) Hello, Tomas Volf <~@wolfsden.cz> writes: > The permissions on the very top level directory differ (which one are > correct?): > > Laptop: > > --8<---------------cut here---------------start------------->8--- > $ ls -al /gnu/store/ | grep 1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden > drwxr-xr-x 1 root root 16 Jan 1 1970 1bjf1lza4i= 7fc1jh8qzb1n9xnv3rfi17-wolfsden > --8<---------------cut here---------------end--------------->8--- > > Remote: > > --8<---------------cut here---------------start------------->8--- > $ ls -al /gnu/store/ | grep 1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden > dr-xr-xr-x 1 root root 16 Jan 1 1970 1bjf1lza4i7fc1jh8qzb1n9= xnv3rfi17-wolfsden > --8<---------------cut here---------------end--------------->8--- > > > > The target of symbolic link in the store item differs. > > Laptop: > > --8<---------------cut here---------------start------------->8--- > $ ls -l /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile/= site/ > total 4 > lrwxrwxrwx 1 root root 61 Jan 1 1970 3.0 -> /gnu/store/rmwi813mcsg8d5il= zq0rxwqd8dp558r5-wolfsden-989d91d/ > --8<---------------cut here---------------end--------------->8--- > > Remote: > > --8<---------------cut here---------------start------------->8--- > $ ls -l /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile/= site/ > total 4 > lrwxrwxrwx 1 root root 60 Jan 1 1970 3.0 -> /gnu/store/rmwi813mcsg8d5il= zq0rxwqd8dp558r5-wolfsden-989d91d > --8<---------------cut here---------------end--------------->8--- > > Notice that for the Laptop, the target ends in `/', for the Remote it > does not. Interesting. There are several code paths to add a store item to the store. One is through (guix store =E2=80=A6), use by =E2=80=98guix offload=E2=80=99. One= is through =E2=80=98guix substitute=E2=80=99, which restores nars it downloaded. One is through a b= uild via guix-daemon (C++ code). Could you tell how these two differing things were obtained? On each machine, run =E2=80=98guix build --log-file /gnu/store/1bjf1lza4i7f= c1jh8qzb1n9xnv3rfi17-wolfsden=E2=80=99. If there=E2=80=99s a local log file, it was built locally or offloaded; otherw= ise it was substituted. Could you also report the guix-daemon versions that are running on each machine? An interesting puzzle. :-) Thanks, Ludo=E2=80=99.
bug-guix@HIDDEN
:bug#77716
; Package guix
.
Full text available.Received: (at submit) by debbugs.gnu.org; 10 Apr 2025 21:33:20 +0000 From debbugs-submit-bounces <at> debbugs.gnu.org Thu Apr 10 17:33:20 2025 Received: from localhost ([127.0.0.1]:47354 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from <debbugs-submit-bounces <at> debbugs.gnu.org>) id 1u2zWR-0007M4-Sl for submit <at> debbugs.gnu.org; Thu, 10 Apr 2025 17:33:20 -0400 Received: from lists.gnu.org ([2001:470:142::17]:44118) by debbugs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.84_2) (envelope-from <~@wolfsden.cz>) id 1u2zWO-0007Lc-5r for submit <at> debbugs.gnu.org; Thu, 10 Apr 2025 17:33:17 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <~@wolfsden.cz>) id 1u2zWA-0003CO-KL for bug-guix@HIDDEN; Thu, 10 Apr 2025 17:33:02 -0400 Received: from wolfsden.cz ([37.205.8.62]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from <~@wolfsden.cz>) id 1u2zW7-0007ar-Ou for bug-guix@HIDDEN; Thu, 10 Apr 2025 17:33:01 -0400 Received: by wolfsden.cz (Postfix, from userid 104) id 2EFA429C6DF; Thu, 10 Apr 2025 21:32:55 +0000 (UTC) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=wolfsden.cz; s=mail; t=1744320775; bh=ChU3gbAtKgEtPDJoNlrUbUjZdSRYbxeWF+RzyIzHapE=; h=From:To:Subject:Date; b=ik1bnHyLOYm22OvMzkzwoWZfVyI3jFKyJEanfPvgORV+dGDpN7Tjxa2h05U9K6dYg xGgw5uVUZyHUjEKkyy5V2WeEqJ3JCtlbXl73t7WiKQPlKXUKXTrcW/9WcI78hCyfEG VMAFRZI+c3NxkMot3IzR2TLB2Hw7cF9rygy6n2FMY+lllVwF44qf8sVD7/8R5VhjeO Agky+DMN4h75GdV9A6ceo0kSQXzNzEqJfZE9zfsH22JAtp1ezcWZ7hB+TEzNUtnZek AqR0HJGq9S/cQZwpfLZcYLjvp0ATx0XhUiR09abbDQC9w04ZESaK/bzV1M3erLZ9CT UtImnp2jJDVYX4S48zLgWpIkioobuHmnzreS35/G78N2HJTCxjHVeuZzvtV3Wo3vRc IbjZpiArHg7melb0XcGlJ0CQ1kHAWfzRYDzw0GExSsJVYK7ol3fLRX6tf3GFSwdB16 RxzMXSs6Fpans9aPjNuW39o903oaaSK5L/0v5o3/f8+kwONQ6UH75IcG31D9lmPgPO gKc2LHMyKCpFIGHEJertKwhNPByoNw98djpCkiPOHSfwWwnIZ6hRSL/+T+sdvtwqQ0 LQzcAHr+T0PVK5a/67Fwb04NQXz4KNeL5Jw+87T6tucCCRiARuTDwA5f8nHyu8Q8TH 0LB+DMTj/GqkAxHDjLd8lk14= X-Spam-Checker-Version: SpamAssassin 3.4.6 (2021-04-09) on wolfsden X-Spam-Level: X-Spam-Status: No, score=-3.1 required=5.0 tests=ALL_TRUSTED,BAYES_00, DKIM_SIGNED,DKIM_VALID,DKIM_VALID_AU,DKIM_VALID_EF,URIBL_BLOCKED autolearn=ham autolearn_force=no version=3.4.6 Received: from localhost (unknown [128.0.188.242]) by wolfsden.cz (Postfix) with ESMTPSA id 5754329D023 for <bug-guix@HIDDEN>; Thu, 10 Apr 2025 21:32:54 +0000 (UTC) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=wolfsden.cz; s=mail; t=1744320774; bh=ChU3gbAtKgEtPDJoNlrUbUjZdSRYbxeWF+RzyIzHapE=; h=From:To:Subject:Date; b=yJBEKiVRhkbk2rIiiSmFcWP/bR/MgeyGCvDIUjqV+/XrWtvimbLQ5tPwPfLcDkve+ D1te99/he18oE8R61QZTUMxj/eGq01IodX/DvoG34tM0KiSLXvmYQ7wKZByEUDPdhp C2pyUNwRIWtv0GjuAE8f2Gv7fBe0Clo0yNjkUkOOgbNl6gVxx3FmH49YVw9D5BlZ0T /7lw3p/CIH5AUh66f1BaCaCZ9yUphkYBX+5xPEzU+QV+IGAcETfBZO4bZaXdholdJQ evh56ivAmQ6VU5qk0hk2pxUsqIKf7Je0jUp3buK64O2WDCkvPXatNSufxdDC/Qzf8h uKHGt/bSROGkPlhV4Wc8oNwAqlwVRqezfXqphszQVnYPKshHQlRUd796Ur5SQg18MO m8hrHn1vRaiF7SWlLh1AuUwvCjHhpODx055V84LhhRpwqzuhLoyJuluZlKY0J46VM2 4XsXq7AWPlfJjdSiAQbhUphtHVh3VAHS0+vxK6mhV/wKTBccSLxAxu2AcMtl2bG+72 03V5ufH9DNfpF+bhJJpP1L2opok6XIAwEu2SLMeo2Lq0T8Tl2aMiSrfysj5P0IeRpk XKm/7ThDroP0/9Trlz44BHPdqWI0ftCHI3L4V5WF+JdDspzD7NGeYFlCiOSekZBwYu 5ME/5Ijnf7rffnmJw4M9rD+Y= From: Tomas Volf <~@wolfsden.cz> To: bug-guix@HIDDEN Subject: Corrupted store after Guix deploy Date: Thu, 10 Apr 2025 23:32:53 +0200 Message-ID: <87iknb66t6.fsf@HIDDEN> User-Agent: Gnus/5.13 (Gnus v5.13) MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: quoted-printable Received-SPF: pass client-ip=37.205.8.62; envelope-from=~@wolfsden.cz; helo=wolfsden.cz X-Spam_score_int: -20 X-Spam_score: -2.1 X-Spam_bar: -- X-Spam_report: (-2.1 / 5.0 requ) BAYES_00=-1.9, DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, DKIM_VALID_EF=-0.1, RCVD_IN_VALIDITY_RPBL_BLOCKED=0.001, RCVD_IN_VALIDITY_SAFE_BLOCKED=0.001, SPF_HELO_PASS=-0.001, SPF_PASS=-0.001 autolearn=ham autolearn_force=no X-Spam_action: no action X-Spam-Score: 1.0 (+) X-Debbugs-Envelope-To: submit X-BeenThere: debbugs-submit <at> debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list List-Id: <debbugs-submit.debbugs.gnu.org> List-Unsubscribe: <https://debbugs.gnu.org/cgi-bin/mailman/options/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=unsubscribe> List-Archive: <https://debbugs.gnu.org/cgi-bin/mailman/private/debbugs-submit/> List-Post: <mailto:debbugs-submit <at> debbugs.gnu.org> List-Help: <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=help> List-Subscribe: <https://debbugs.gnu.org/cgi-bin/mailman/listinfo/debbugs-submit>, <mailto:debbugs-submit-request <at> debbugs.gnu.org?subject=subscribe> Errors-To: debbugs-submit-bounces <at> debbugs.gnu.org Sender: "Debbugs-submit" <debbugs-submit-bounces <at> debbugs.gnu.org> X-Spam-Score: -0.0 (/) Hello, I just finished Guix deploy. The command has finished successfully, without any warnings or errors. However when I checked the store, I can see that some paths are corrupted: --8<---------------cut here---------------start------------->8--- $ guix gc --verify=3Dcontents reading the store... checking path existence... checking hashes... path `/gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden' was modified! e= xpected hash `b40d36eb683b0143cb192e37ba18f1bb31a437016e8a2f82a3623942b39c9= 3b8', got `b3ecf9df08d6bd70dc2482ff68d606802aa8d1623b8efd8bcd0485bbe670cd4c' path `/gnu/store/my2g20c7spa8ixpnr92s302wj97cxl86-nonguix' was modified! ex= pected hash `4e478e5e311d2a1205b01681de5d4fd2aaba7e9367bdf83ac2c74b3a18322b= c5', got `9b8c244c6a1592c1a067bb0f1682b087322258c52dd91a95da7f2d7fbb03a7c3' --8<---------------cut here---------------end--------------->8--- I know there already are some issues in the similar spirit, but consensus there seems to be that missing/wrong sync is to blame. So I am making a new bug, because this one is not affected by (possible) sync issues. I did not even reboot (yet), I have verified the store *before* rebooting. Indeed, the guix hashes do differ: Laptop: --8<---------------cut here---------------start------------->8--- $ guix hash -r /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden 1f4kkjrl4fb2lf12z2kf04vs8cdvy4cbldrf375l609vd3mkc3dl --8<---------------cut here---------------end--------------->8--- Remote: --8<---------------cut here---------------start------------->8--- $ guix hash -r /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden 0k6df3kbp184rn5zv3ivcb8shal00vb6izw24kf71gfn13gzkv5k --8<---------------cut here---------------end--------------->8--- I have checked the files themselves (sha256sum), and they are the same on both machines. However I have noticed couple of differences listed below: The permissions on the very top level directory differ (which one are correct?): Laptop: --8<---------------cut here---------------start------------->8--- $ ls -al /gnu/store/ | grep 1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden drwxr-xr-x 1 root root 16 Jan 1 1970 1bjf1lza4i7f= c1jh8qzb1n9xnv3rfi17-wolfsden --8<---------------cut here---------------end--------------->8--- Remote: --8<---------------cut here---------------start------------->8--- $ ls -al /gnu/store/ | grep 1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden dr-xr-xr-x 1 root root 16 Jan 1 1970 1bjf1lza4i7fc1jh8qzb1n9xn= v3rfi17-wolfsden --8<---------------cut here---------------end--------------->8--- The target of symbolic link in the store item differs. Laptop: --8<---------------cut here---------------start------------->8--- $ ls -l /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile/si= te/ total 4 lrwxrwxrwx 1 root root 61 Jan 1 1970 3.0 -> /gnu/store/rmwi813mcsg8d5ilzq= 0rxwqd8dp558r5-wolfsden-989d91d/ --8<---------------cut here---------------end--------------->8--- Remote: --8<---------------cut here---------------start------------->8--- $ ls -l /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile/si= te/ total 4 lrwxrwxrwx 1 root root 60 Jan 1 1970 3.0 -> /gnu/store/rmwi813mcsg8d5ilzq= 0rxwqd8dp558r5-wolfsden-989d91d --8<---------------cut here---------------end--------------->8--- Notice that for the Laptop, the target ends in `/', for the Remote it does not. Additionally it is interesting that in addition I have exactly on more corrupted path, and that is another channel: --8<---------------cut here---------------start------------->8--- $ guix gc --verify=3Dcontents reading the store... checking path existence... checking hashes... path `/gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden' was modified! e= xpected hash `b40d36eb683b0143cb192e37ba18f1bb31a437016e8a2f82a3623942b39c9= 3b8', got `b3ecf9df08d6bd70dc2482ff68d606802aa8d1623b8efd8bcd0485bbe670cd4c' path `/gnu/store/my2g20c7spa8ixpnr92s302wj97cxl86-nonguix' was modified! ex= pected hash `4e478e5e311d2a1205b01681de5d4fd2aaba7e9367bdf83ac2c74b3a18322b= c5', got `9b8c244c6a1592c1a067bb0f1682b087322258c52dd91a95da7f2d7fbb03a7c3' --8<---------------cut here---------------end--------------->8--- I have copied the store item back using `rsync -a ...', and this is what diffoscope has to say (the same as above): --8<---------------cut here---------------start------------->8--- 2025-04-10 21:06:56 W: diffoscope.comparators.xml: Vulnerable version of py= expat detected; disabling comparison of XML documents. Install defusedxml o= r upgrade your pyexpat. --- /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden +++ /tmp/xxxx/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden =E2=94=9C=E2=94=80=E2=94=80 /gnu/store/lm25j7769nfzgfmx8gh28zarrlczgh8r-cor= eutils-9.1/bin/stat {} =E2=94=82 @@ -1,8 +1,8 @@ =E2=94=82 =E2=94=82 Size: 16 Blocks: 0 IO Block: 4096 directory =E2=94=82 Device: 0,25 Links: 1 =E2=94=82 -Access: (0755/drwxr-xr-x) Uid: ( 0/ root) Gid: ( 0/ = root) =E2=94=82 +Access: (0555/dr-xr-xr-x) Uid: ( 0/ root) Gid: ( 0/ = root) =E2=94=82 =E2=94=82 Modify: 1970-01-01 00:00:01.000000000 +0000 =E2=94=82 --- /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share =E2=94=9C=E2=94=80=E2=94=80 +++ /tmp/xxxx/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-= wolfsden/share =E2=94=82 =E2=94=82 --- /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfs= den/share/guile =E2=94=82 =E2=94=9C=E2=94=80=E2=94=80 +++ /tmp/xxxx/1bjf1lza4i7fc1jh8qzb1n9= xnv3rfi17-wolfsden/share/guile =E2=94=82 =E2=94=82 =E2=94=82 --- /gnu/store/1bjf1lza4i7fc1jh8qzb1n9xnv3r= fi17-wolfsden/share/guile/site =E2=94=82 =E2=94=82 =E2=94=9C=E2=94=80=E2=94=80 +++ /tmp/xxxx/1bjf1lza4i7fc= 1jh8qzb1n9xnv3rfi17-wolfsden/share/guile/site =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 --- /gnu/store/1bjf1lza4i7fc1jh8q= zb1n9xnv3rfi17-wolfsden/share/guile/site/3.0 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=9C=E2=94=80=E2=94=80 +++ /tmp/xxxx/1bj= f1lza4i7fc1jh8qzb1n9xnv3rfi17-wolfsden/share/guile/site/3.0 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82=E2=94=84 symlink =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 @@ -1 +1 @@ =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 +destination: /gnu/store/rmwi813mcs= g8d5ilzq0rxwqd8dp558r5-wolfsden-989d91d =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 -destination: /gnu/store/rmwi813mcs= g8d5ilzq0rxwqd8dp558r5-wolfsden-989d91d/ =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=9C=E2=94=80=E2=94=80 /gnu/st= ore/lm25j7769nfzgfmx8gh28zarrlczgh8r-coreutils-9.1/bin/stat {} =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 @@ -1,8 +1,8 @@ =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 + Size: 60 Block= s: 8 IO Block: 4096 symbolic link =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 - Size: 61 Block= s: 8 IO Block: 4096 symbolic link =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 Device: 0,25 Links: 1 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 Access: (0777/lrwxrwxrwx= ) Uid: ( 0/ root) Gid: ( 0/ root) =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 =E2=94=82 Modify: 1970-01-01 00:00= :01.000000000 +0000 --8<---------------cut here---------------end--------------->8--- Any idea what might have happen? I cannot really reproduce it now, not sure it the issue went away with newer Guix or whether it was random flap. I just wonder whether the other end should not checksum the entries before putting them into the store and reject them if the hash is wrong. Tomas --=20 There are only two hard things in Computer Science: cache invalidation, naming things and off-by-one errors.
Tomas Volf <~@wolfsden.cz>
:bug-guix@HIDDEN
.
Full text available.bug-guix@HIDDEN
:bug#77716
; Package guix
.
Full text available.
GNU bug tracking system
Copyright (C) 1999 Darren O. Benham,
1997 nCipher Corporation Ltd,
1994-97 Ian Jackson.