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Subject: [bug#77542] [PATCH python-team 00/38] Further patches on python-team.
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As usual. A few notes:
- clipper2 was added for cura IIRC, which requires it but isn't ready yet / requires more work.
- I couldn't test python-pytensor update because of build times, so it might still break.
Nicolas Graves (38):
gnu: Add clipper2.
gnu: labelme: Add missing native-inputs.
gnu: scregseg: Add missing native-inputs.
gnu: autokey: Add missing native-inputs.
gnu: mageck: Add missing native-inputs.
gnu: python-pytroch-geometric: Skip failing tests.
gnu: Add string-view-lite.
gnu: python-pytensor: Update to 2.30.1.
gnu: python-vaex-core: Update to 4.17.1.
gnu: Remove pybind11-2.3.
gnu: python-property-cached: Fix build.
gnu: python-attr: Update to 0.3.2.
gnu: python-serpent: Update to 1.41.
gnu: python-pyro4: Update to 4.82.
gnu: python-lcapy: Add missing native-inputs.
gnu: python-linear-operator: Update to 0.6.
gnu: gpytorch: Remove uneeded inputs.
gnu: python-botorch: Add missing native-inputs.
gnu: python-gpytorch: Update to 1.14.
gnu: python-botorch: Update to 0.13.0.
gnu: python-pgmpy: Update to 1.0.0.
gnu: python-qasync: Ignore failing test.
gnu: python-bed-reader: Fix build and enable tests.
gnu: python-pysnptools: Fix build and enable tests.
gnu: Add python-poetry-core-next.
gnu: python-duniterpy: Update to 1.2.1.
gnu: python-pgpy: Fix tests.
gnu: python-furl: Update to 2.1.4.
gnu: python-rq: Update to 2.3.1.
gnu: python-crontab: Update to 3.2.0.
gnu: python-stone: Update to 3.3.9.
gnu: python-rq-scheduler: Update to 0.14.
gnu: python-port-for: Update to 0.7.4.
gnu: Remove python-cookies.
gnu: python-django-rq: Update to 3.0.0.
gnu: python-flask-seasurf: Update to 2.0.0.
gnu: python-country-converter: Add missing native-input.
gnu: python-itemloaders: Update to 1.3.2.
gnu/local.mk | 3 +
gnu/packages/bioinformatics.scm | 280 ++++++++++++++----
gnu/packages/cpp.scm | 56 +++-
gnu/packages/databases.scm | 67 +++--
gnu/packages/django.scm | 28 +-
gnu/packages/engineering.scm | 4 +-
gnu/packages/finance.scm | 40 +--
gnu/packages/image-processing.scm | 3 +-
gnu/packages/iso-codes.scm | 3 +-
gnu/packages/machine-learning.scm | 56 ++--
.../python-bed-reader-use-store-samples.patch | 147 +++++++++
.../python-property-cached-asyncio-3_11.patch | 201 +++++++++++++
.../python-vaex-core-fix-tsl-use.patch | 67 +++++
gnu/packages/python-build.scm | 10 +
gnu/packages/python-crypto.scm | 15 +-
gnu/packages/python-science.scm | 87 +++---
gnu/packages/python-web.scm | 60 ++--
gnu/packages/python-xyz.scm | 186 ++++++------
gnu/packages/statistics.scm | 16 +-
19 files changed, 987 insertions(+), 342 deletions(-)
create mode 100644 gnu/packages/patches/python-bed-reader-use-store-samples.patch
create mode 100644 gnu/packages/patches/python-property-cached-asyncio-3_11.patch
create mode 100644 gnu/packages/patches/python-vaex-core-fix-tsl-use.patch
--
2.49.0
Content-Disposition: inline Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Mailer: MIME-tools 5.505 (Entity 5.505) Content-Type: text/plain; charset=utf-8 X-Loop: help-debbugs@HIDDEN From: help-debbugs@HIDDEN (GNU bug Tracking System) To: Nicolas Graves <ngraves@HIDDEN> Subject: bug#77542: Acknowledgement ([PATCH python-team 00/38] Further patches on python-team. ) Message-ID: <handler.77542.B.174379382414853.ack <at> debbugs.gnu.org> References: <20250404190959.30444-1-ngraves@HIDDEN> X-Gnu-PR-Message: ack 77542 X-Gnu-PR-Package: guix-patches X-Gnu-PR-Keywords: patch Reply-To: 77542 <at> debbugs.gnu.org Date: Fri, 04 Apr 2025 19:11:02 +0000 Thank you for filing a new bug report with debbugs.gnu.org. This is an automatically generated reply to let you know your message has been received. Your message is being forwarded to the package maintainers and other interested parties for their attention; they will reply in due course. Your message has been sent to the package maintainer(s): guix-patches@HIDDEN If you wish to submit further information on this problem, please send it to 77542 <at> debbugs.gnu.org. Please do not send mail to help-debbugs@HIDDEN unless you wish to report a problem with the Bug-tracking system. --=20 77542: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=3D77542 GNU Bug Tracking System Contact help-debbugs@HIDDEN with problems
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